PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK17078.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family GRAS
Protein Properties Length: 69aa    MW: 7626.53 Da    PI: 7.8104
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK17078.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS74.71.7e-23267115182
       GRAS 115 iDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvp.fefnvlv 182
                iD+di+qGlQWpaL++ La+R egpp ++RiTgvgs    s e l++tg+ L++fA++lg++ fefn++v
  PK17078.1   2 IDLDIMQGLQWPALFHILATRVEGPPlHVRITGVGS----SPELLSQTGQHLSSFAKRLGINsFEFNPVV 67 
                9*********************99999*********....9********************55*****75 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098518.41169IPR005202Transcription factor GRAS
PfamPF035145.9E-21267IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
XIDLDIMQGL QWPALFHILA TRVEGPPLHV RITGVGSSPE LLSQTGQHLS SFAKRLGINS  60
FEFNPVVRN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002272465.26e-27PREDICTED: protein SCARECROW-like
SwissprotQ9M3842e-21SCR_ARATH; Protein SCARECROW
TrEMBLA5AXM86e-27A5AXM8_VITVI; Putative uncharacterized protein
TrEMBLF6HZL97e-27F6HZL9_VITVI; Putative uncharacterized protein
STRINGVIT_07s0005g03700.t012e-26(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-22GRAS family protein